Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG
1LHS Chain:A ((1-153))
-GLSDDEWNHVLGIWAKVEPDLSAHGQEVIIRLFQLHPETQERFAKFKNLTTIDALKSSEEVKKHGTTVLTALGRILKQKNNHEQELKPLAESHATKHKIPVKYLEFICEIIVKVIAEKHPSDFGADSQAAMKKALELFRNDMASKYKEFGFQG
General information:
TITO was launched using:
RESULT:
Template:
1LHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66622 for 1130 contacts (-59.0/contact) +
2D Compatibility (PS) -16282 + (NN) -9965 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 5150
Total energy: -115011.0 ( -101.78 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_1LHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LHS-query.scw
PDB file :
Tito_Scwrl_1LHS.pdb
: