Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MP-NFSGNWKIIRSENFEEMLKALGVNMMMRKIAVAAASKPAVEIKQENDTFYIKTSTTVRTTEINFKIGEEFEEQTVDGRPCKSLVKWESGNKMVCEQRLLKGEGPKTSWSRELTNDGELILTMTADDVVCTRVYVRE
3WBG Chain:A ((21-152))
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVA--SMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLD-GGKLVHLQ---KWDGQETTLVRELI-DGKLILTLTHGTAVCTRTYEKE
General information:
TITO was launched using:
RESULT:
Template:
3WBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33538 for 934 contacts (-35.9/contact) +
2D Compatibility (PS) -14728 + (NN) -4847 + (LL) 680
1D Compatibility (HY) -10400 + (ID) 2950
Total energy: -65783.0 ( -70.43 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_3WBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WBG-query.scw
PDB file :
Tito_Scwrl_3WBG.pdb
: