Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
1I4T Chain:D ((2-136))
-QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTP
General information:
TITO was launched using:
RESULT:
Template:
1I4T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59313 for 926 contacts (-64.1/contact) +
2D Compatibility (PS) -14759 + (NN) -10631 + (LL) 208
1D Compatibility (HY) -19600 + (ID) 5050
Total energy: -109145.0 ( -117.87 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1I4T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I4T-query.scw
PDB file :
Tito_Scwrl_1I4T.pdb
: