Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
1U8Z Chain:A ((2-167))
LALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAG---YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRA------------------------
General information:
TITO was launched using:
RESULT:
Template:
1U8Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97032 for 1300 contacts (-74.6/contact) +
2D Compatibility (PS) -17881 + (NN) -8068 + (LL) 2392
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -143339.0 ( -110.26 by residue)
QMean score : 0.547
(partial model without unconserved sides chains):
PDB file :
Tito_1U8Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U8Z-query.scw
PDB file :
Tito_Scwrl_1U8Z.pdb
: