Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRRITLNSNFMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQI--NFYSMYNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR
2WJG Chain:A ((5-167))
-----------------------MKSYEIALIGNPNVGKSTIFNALTGEN-VY-IGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSLTANSI--D--EIIARDYI-INEKPDLVVNIVDATALE--RNLYLTLQLMEMGANLLLALNKMDLAKSLGIEIDVDKLEKIL---GVKVVPLSAAKKMGIEELKKAISIAVK
General information:
TITO was launched using:
RESULT:
Template:
2WJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101337 for 1254 contacts (-80.8/contact) +
2D Compatibility (PS) -16930 + (NN) -2929 + (LL) 2228
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -126268.0 ( -100.69 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_2WJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJG-query.scw
PDB file :
Tito_Scwrl_2WJG.pdb
: