Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSFILSTGSYLPKKKLGNDEIALMVETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNV-DVLCTKGGISSTGD-SGKIYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY
1HNJ Chain:A ((1-317))-MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSG-AVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEE---------PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF


General information:
TITO was launched using:
RESULT:

Template: 1HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -274664 for 3001 contacts (-91.5/contact) +
2D Compatibility (PS) -32717 + (NN) -7216 + (LL) 520
1D Compatibility (HY) -25200 + (ID) 7500
Total energy: -346777.0 ( -115.55 by residue)
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1HNJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HNJ-query.scw
PDB file : Tito_Scwrl_1HNJ.pdb: