Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
3N0C Chain:B ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSFDMGLKDEERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELSGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRAFATVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEVQV-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158164 for 1522 contacts (-103.9/contact) +
2D Compatibility (PS) -21326 + (NN) -1850 + (LL) 4888
1D Compatibility (HY) -17600 + (ID) 4800
Total energy: -198852.0 ( -130.65 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3N0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0C-query.scw
PDB file :
Tito_Scwrl_3N0C.pdb
: