Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKDYYKLLGVDRNASTDEIKKAYKKLALKYHPDRNPGNKEAEEKFKEITAAYEVLSDSEKRAGYDRYGHEGASGGFDFSQGFGSAGDFSDIFNDFFGGEFGSSSRSKAKRSTTGVPGADLRYDLEITLEDAFKGIQAPIHYVTNVKCDMCQGRGSEGATKPVQCHTCQGSGRIRTQQGFFTIERTCTTCY-GEGEIIQNKCKKCNGSGR-RRDEVNISVSIPKGIEEGAKVRVSGKGEAGAKGGKSGDLYVYVKITPHKIFTRNKADLHCKVPIRMTLAVLGGEIDVQSIDGAKIKVKVPEGTQTSTKLRCKEKGMPYMNSYARGDLYVQIIVETLNPNNLTKKQIELLKALEEEENASIQQQSEGFFSKVKKK |
| 3LZ8 Chain:A ((113-302)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGIESETPKTLNVKIPAGVVDGQRIRLKGQGT---PGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLV--SKTHTGDLFAVIKIVM--PTKPDEKARELWQQLAAAEASFDPRKTW--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61501 for 1133 contacts (-54.3/contact) +
2D Compatibility (PS) -19936 + (NN) -5931 + (LL) 7888
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -93030.0 ( -82.11 by residue)
QMean score : 0.494
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