Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKQIQTEADELGFFGEYGGQYVPETLMPAIIELKKAYKEAKADPEFQRELEYYLSEYVGRATPLTYAASYTESLGG-AKIYLKREDLNHTGAHKINNALGQALLAKRMGKKKLVAETGAGQHGVASATVAALFDMELVVFMGSEDIKRQQLNVFRMELLGAKVVA-----VEEGQ----------GTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVE----AAGQGEDTDKHALAIGK----GSPGVLHGTKMYLIQDEGGQVQLAHSISAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALSYVERLAPTMSK---EDIIVVTISGRGDKDMETIRQYMAERGLAND |
| 4QYS Chain:B ((45-419)) | ------------------------EVLPSKVLELEFAKERYVKIPD--EVLERYLQ--VGRPTPIIRAKRLEEYLGNNIKIYLKMESYTYTGSHKINSALAHVYYAKLDNAKFVTTETGAGQWGSSVALASALFRMKAHIFMVRTSYYAKPYRKYMMQMYGAEVHPSPSDLTEFGRQLLAKDSNHPGSLGIAISDAVEY--AHKNGGKYVVGSVVNSDIM------FKTIAGMEAKKQ-MELIGEDPDYIIGVVGGGSNYAALAYPFLGDELRSGKVRRKYIASGSSE-VPKMTKGVYKYDYPDTAKLLPMLKMYTI---GSDFVPPPVYAGGLRYHGVAPTLSLLISKGIVQARDYSQEESFKWAKLFSELEGYIPAPETSHALPILAEIAEEAKKSGERKTVLVSFSGHGLLDL--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QYS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -90670 for 3212 contacts (-28.2/contact) +
2D Compatibility (PS) -37506 + (NN) -10344 + (LL) 3800
1D Compatibility (HY) -20000 + (ID) 6100
Total energy: -160820.0 ( -50.07 by residue)
QMean score : 0.418
|
|
|