Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSR-DVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKKKLADWHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK |
2YZ2 Chain:A ((1-229)) | MRIEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGY-------EIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPD-RDPVPLVKKAMEFVGLDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKT-LGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEKY------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118102 for 1861 contacts (-63.5/contact) +
2D Compatibility (PS) -24871 + (NN) -13545 + (LL) 5232
1D Compatibility (HY) -19600 + (ID) 3900
Total energy: -174786.0 ( -93.92 by residue)
QMean score : 0.510
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