Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIKANEALVKALQAWDIDHLYGIPGDSIDAVVDSLRTVRDQFKFYHVRHEEVASLAAAGYTKLTGKIGVALSIGGPGLIHLLNGMYDAKMDNVPQLILSGQTNSTALGTKAFQE---TNLQKLCEDVAVYNHQIEKGDNVFEIVNEAIRTAYEQKGVAVVICPNDLLTEKIKDTTNKPVDTSRPTVVSPK------YKDIKKAVKLINKSKKPVMLIGVGA-KHAKDELREFIEMAKIPVIHSLPAKTILPDDHPYSIGNL-GKIGTKTSYQTMQEADLLIMVGTNYPY--VDYLPKKNIKAIQIDTNPKNIGHRFNINVGIVG-DSKIALHQLTENIKHVAERPFLNKTLERKAVWDKWMEQDKNNNSKPLRPERLMASINKFIKDDAVISADVGTATVWSTRYLNLGVNNKFIISSWLGTMGCGLPGAMASKIAYPN-RQAIAIAGDGAFQMVMQDFATAVQYDLPLTVFVLNNKQLAFIKYEQQAAGELEYAV-DFSDMDHAKFAEAAGG-KGYTIKSASEVDAIVEEALAQDV----PTIVDVYVDPNAAPLPGKIVNEEALGYGKWAFRSITEDKYLDLDQIPPISVAAKRFL |
| 1POX Chain:A ((1-542)) | -TNILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNM--DTFQEM-NENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQGVAVVQIPVDLPWQQISAEDWYASANNYQTPLLPEPDVQAVTRLTQTLLA----AERPLIYYGIGAR-KAGKELEQLSKTLKIPLMSTYPAKGIVADRYPAYLGSAN-RVAQKPANEALAQADVVLFVGNNYPFAEVSKAFKNTRYFLQIDIDPAKLGKRHKTDIAVL-ADAQKTLAAILAQVSERESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYP-ERQVFNLAGDGGASMTMQDLVTQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDIDFSKIADGVH-MQAFRVNKIEQLPDVFEQ--AKAIAQHEPVLIDAVITGDRPL------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1POX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267921 for 4701 contacts (-57.0/contact) +
2D Compatibility (PS) -56376 + (NN) -24616 + (LL) 3520
1D Compatibility (HY) -36800 + (ID) 8850
Total energy: -391043.0 ( -83.18 by residue)
QMean score : 0.559
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