Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKNVLLSGGSGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKR--NASLVDETLIVCNEKHYFLALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKE--DLLIVTPSDHLIKDFQAYENAIKKAINLAQKGFLVTFGISIEKPNTEFGYIESPNGLD----VKRFIEKPSLEKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCERAFESLENTHFFEQKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAANGTKENVSLNQTPIFAKESTNNLVFS-HKVSALLGVEDLAIIDTKDALLVAHKDKAKDLKALVSEIETHNQELLQTHTKVYRPWGSYEVLHESGCYKVKILEVKPNARLSLQKHFHRSEHWVVISGMASVELDHQSFELQANESTYIPKNTLHRLANYGKIPLIIIEVQVGEYVGEDDIVRVDDDFNRQNQNA |
2CU2 Chain:A ((1-335)) | MKTYALVMAGGRGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADGI------RLLLEPLGRDTAGAVLLGVAEALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEEGFVVALGLRPTRPETEYGYIRLGPREGAWYRGEGFVEKPSYAEALEYIRKG-YVWNGGVFAFAPATMAELFRRHLPSHHEALERLLAG------------ASLEEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVFSQDPHENVVLGEGRHVALDTFGCVVYADRGVVATLGVSGLVVAKVGDEVLVVPKDWAREVREVVKRLEA----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143816 for 2735 contacts (-52.6/contact) +
2D Compatibility (PS) -35118 + (NN) -11775 + (LL) 10356
1D Compatibility (HY) -22800 + (ID) 5200
Total energy: -208353.0 ( -76.18 by residue)
QMean score : 0.560
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