Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWD----K---EEGIMDTIKHGSKGMDYPAGEMPAIE--MDEKDAKAIASYVMAELSSVKK---------------TKNPQLIDKGKELFESMGCAGCHGNDGKGLQENQVFAADLTTYGTESFLRNILTHGKKGNIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
2D0W Chain:A ((44-168)) | -----------------------------------------------------------------------------------------------------------------VAGCLPKGEEIYLESCSGCHGHIGEGKV--GPGLNDSYWTYPKNTTDKGLFETIFGGAN------GMMGPHGQDLELDNMLKLIAWIRHIQKDDVADADWLSDEQKKNFKPFDIKAWEATGKAAAEKAQCKIS---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21200 for 656 contacts (-32.3/contact) +
2D Compatibility (PS) -10521 + (NN) -2127 + (LL) 12044
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -24054.0 ( -36.67 by residue)
QMean score : 0.342
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