Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFYTYSGETAAEALKIAQSHHGVDTLVFKTQEIRKKTLTSSGLYEIVVAVEEEENKKAPLIPESLYDEELNEEDVVMQLSSTVEEMRKLAGVSSNQRNYTFSKNKTLLEKDAPLEDTPLEANKQDALLQALKDEANHKKEREKREVKQEEEIKDINAQLSKIRDSLKLIQNMFWDEKNPNSVNIPQEFAEIYKLAKQSGMKSSHLDEIMQLSLELMPLRM---RENSV-TIKRYF-REVLRKIILCRPEDLNLRQKRILMLVGPTGVGKTTTLAKLAARYSRMLAKKYKVGIITLDNYRIGALEQLSWYANKMKMSIEAVID---AKDFAKEIEA---LEYCDFILVDTTGHSQYDKEKIAGLKEFIDGGYNIDVSLVLSVTTKYEDMKDIYDSFG-VLGIDTLIFTKLDESRGLGNLFSLVHESQKPISYLSVGQEVPMDLKVATNEYLVDCMLDGFSNPNKEQA |
| 2FFH Chain:A ((27-295)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKATLREIRRALMDADVNLEVTRDFVERVREEALGKQVLESLTPAEVILATVYEALKEALGGEARL-PVLKDRNLWFLVGLQGSGKTTTAAKLALYYK---GKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQ-EALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEK-PEGLEPFYPERLAGRILGMGDVASLAEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149833 for 2073 contacts (-72.3/contact) +
2D Compatibility (PS) -27968 + (NN) -12229 + (LL) 14548
1D Compatibility (HY) -5600 + (ID) 3300
Total energy: -184382.0 ( -88.94 by residue)
QMean score : 0.530
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