Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------MHEYSVVSSLIALCEEHAKKNQAHKIERVVVGIGERSAMDKSLFVSAFETFREESLVCKDAILDIVDEKVELECKDCSHVFK-PNALDYGVCEKCHSKNVIITQGNEMRLLSLEMLAE
2X5R Chain:A ((1-124))
GAMARVGPKIEITHGGKKYTVFSKVTHLVPRTENGEEA---EYVVFGPEKEGVI--SVVVLAPKDLNEEALALRVKWFNDTKPR----CVKCGAAYNGKNHFRVVAIRNGTYYLDAVCDKCEPRITWLSAIVI
General information:
TITO was launched using:
RESULT:
Template:
2X5R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43282 for 770 contacts (-56.2/contact) +
2D Compatibility (PS) -11545 + (NN) -1327 + (LL) 876
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -61528.0 ( -79.91 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_2X5R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X5R-query.scw
PDB file :
Tito_Scwrl_2X5R.pdb
: