Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESR---IIVELVKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLIMGLVASGINDE-ELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLD--SAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPT-YLSLQENLNALLNTLFKGKT |
1RQJ Chain:A ((4-294)) | -----PQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVST------NTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAG-DKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLD--TSALEALADYIIQRNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166078 for 2534 contacts (-65.5/contact) +
2D Compatibility (PS) -30392 + (NN) -16875 + (LL) 380
1D Compatibility (HY) -12400 + (ID) 4750
Total energy: -230115.0 ( -90.81 by residue)
QMean score : 0.468
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