Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAIAIK
3K0T Chain:A ((20-142))
-KTVITSDKAPAAIGPYSQAIKAGNTVYMSGQIPLDPSTMEL-VEGIEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFSQPYPARAAIGVAALPRGAQVEMDAILVI
General information:
TITO was launched using:
RESULT:
Template:
3K0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47510 for 925 contacts (-51.4/contact) +
2D Compatibility (PS) -12932 + (NN) -2222 + (LL) 272
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -77042.0 ( -83.29 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3K0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K0T-query.scw
PDB file :
Tito_Scwrl_3K0T.pdb
: