Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNLENLDWKNLGFSYIKTDFRFIATYKNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEEL--FLKACAEVIKANQKWLAPYKSGASLYLRPFVIGVGD-NLGVKPASEYLFIVFCA--PVGAYFKGGIEKGGARFITTAFDRAAPKGT-GGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNKSYSFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEVG |
1I1K Chain:B ((10-307)) | -------------------------------WFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFP-VSQSIDELMEACRDVIRKNNL--------TSAYIRPLIF-VGDVGMGVNPPAGYSTDVIIAAFPW-------ALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNGY--ISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1I1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145791 for 2299 contacts (-63.4/contact) +
2D Compatibility (PS) -30494 + (NN) -15455 + (LL) 2104
1D Compatibility (HY) -16800 + (ID) 4900
Total energy: -211336.0 ( -91.93 by residue)
QMean score : 0.399
|
|
|