Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3P10 Chain:B ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR
General information:
TITO was launched using:
RESULT:
Template:
3P10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110893 for 1314 contacts (-84.4/contact) +
2D Compatibility (PS) -17328 + (NN) -10451 + (LL) 208
1D Compatibility (HY) -12400 + (ID) 4550
Total energy: -155414.0 ( -118.28 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_3P10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P10-query.scw
PDB file :
Tito_Scwrl_3P10.pdb
: