Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-HKDINILQKDIFDLT-LSDLSDQNVVVDAYGVSPDE---------AEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQL-EHLRSHQAEFSWTYISPSAMFEPGERTGDY--QI----GKD-H---LLFGSDGNSFISMEDYAIAVLDEIERPN---HLNERFTVAGK |
3KO8 Chain:A ((1-244)) | MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAG-IKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDAD-VIPTPEEEPYKPISVYGAAKAAGEVMCATYARL-FGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63477 for 1684 contacts (-37.7/contact) +
2D Compatibility (PS) -22158 + (NN) -8120 + (LL) 392
1D Compatibility (HY) -8000 + (ID) 1450
Total energy: -102813.0 ( -61.05 by residue)
QMean score : 0.444
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