Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLCTISDSQALLEVSYKTFDETFRAQNKPENMDAYLKTNFTAKKLSDELKNPHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKKGLGKELFNQAIEIAKEVDAKKIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQTDIIMIKDL
1Z4E Chain:A ((6-149))
TIREATEGDLEQMVHMLADDVLGRKRERYEKPLPVSYV------RAFKEIKKDKNNELIVACNGEEIVGMLQVTFTPYLTYQ-GSWRATIEGVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQRPDALRFYEQLGFKASHEGL-----------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79034 for 987 contacts (-80.1/contact) +
2D Compatibility (PS) -15342 + (NN) -4901 + (LL) 1852
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: -102525.0 ( -103.88 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4E-query.scw
PDB file :
Tito_Scwrl_1Z4E.pdb
: