Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNLKDTVKLANGVEMPRLGFGVWKVQD--GDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIK----ESGIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVKGK--------------------FKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDA---EIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGK-----------LLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF |
| 4JQ3 Chain:A ((7-304)) | -----CVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFN-HRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRNVR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124226 for 2163 contacts (-57.4/contact) +
2D Compatibility (PS) -27992 + (NN) -8638 + (LL) -84
1D Compatibility (HY) -25600 + (ID) 5800
Total energy: -192340.0 ( -88.92 by residue)
QMean score : 0.530
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