Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIENASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMPVILTNLTGKTATVTVKELLPGAFTSEDML
2D30 Chain:A ((10-133))
MNSKQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAVSEGDKEFVAIAIVADTKRPVPPCGACRQVMVELCKQDTKVYLSNLHGDVQETTVGELLPGA-------
General information:
TITO was launched using:
RESULT:
Template:
2D30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73861 for 992 contacts (-74.5/contact) +
2D Compatibility (PS) -13876 + (NN) -6592 + (LL) 568
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -110311.0 ( -111.20 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_2D30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D30-query.scw
PDB file :
Tito_Scwrl_2D30.pdb
: