Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLGIMGTNWITDSFIEGAINSGEWNLTAVYSRTEEKARAFGEKYGELTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAELEHAHQIARENNVFLFEAARHIQEPNFKRLQENIE--KVGTIHGATLAYMKYSSRYDQVLNGEEPNIF-SLKFSGGSIVDLGVYPLYSAITLFGEP-VKATYFATKLPTGVDGLGPIILEYPTF-NITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVANDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK |
| 3EVN Chain:A ((6-323)) | VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQA---KYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNI--------DHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTATFPKGQSDSQSKLLLQLSNGVLVDIFLTTRLNLPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTSA-RT-IQVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGKEG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139122 for 2663 contacts (-52.2/contact) +
2D Compatibility (PS) -33425 + (NN) -13415 + (LL) 932
1D Compatibility (HY) -12400 + (ID) 3650
Total energy: -201080.0 ( -75.51 by residue)
QMean score : 0.410
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