Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTYIALKNNIAYEDEKAIAALLQKTVIRFEPGEV-QQVF-VGSENVTEVIRSIEVTNHVSIVAAHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKENMAKGFTGDLDQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDQVANKILSLAELKINN
1Q3T Chain:A ((14-235))
-MKTIQIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVMDGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQAEDAVYLDTTGLNIQEVVEKIKAEAEKR---
General information:
TITO was launched using:
RESULT:
Template:
1Q3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117437 for 1690 contacts (-69.5/contact) +
2D Compatibility (PS) -24109 + (NN) -14075 + (LL) 252
1D Compatibility (HY) -17600 + (ID) 6500
Total energy: -179469.0 ( -106.19 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1Q3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q3T-query.scw
PDB file :
Tito_Scwrl_1Q3T.pdb
: