Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY------AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
4RHX Chain:D ((21-200))
----DIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSS----------VRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124972 for 1280 contacts (-97.6/contact) +
2D Compatibility (PS) -17715 + (NN) -2455 + (LL) 216
1D Compatibility (HY) -19200 + (ID) 3700
Total energy: -167826.0 ( -131.11 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4RHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHX-query.scw
PDB file :
Tito_Scwrl_4RHX.pdb
: