Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------MNKWLVKASS------LVVLGGMVLSAGSRVL-------------ADTYVRPIDNGRITTGFNGYPGHCGVD----------YAVPTGTIIRAV-ADGTVKFAGAGANF-S-------WMTDLAGNCVMI--------QHADGMHSGYAHMSRVVARTGEKVKQGDIIGYV-GATGMATGPHLHFEF----LPANPNFQNGFHG-RINPTSLIANVATFSGK-TQASAPSIKPLQSAPVQNQSSKLKVYRVD----------ELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQV-LQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
| 4OL8 Chain:A ((24-461)) | PVWLQQKYREIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKA----NYRLTTDASKDGIGAVLEEVDN----KNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLH-GKHFTLRTNHARRVQRWLDDLATYDFTLEY-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52483 for 1669 contacts (-31.4/contact) +
2D Compatibility (PS) -28488 + (NN) -2114 + (LL) 2388
1D Compatibility (HY) -16800 + (ID) 2800
Total energy: -100297.0 ( -60.09 by residue)
QMean score : 0.014
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