Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRDAVKSYKQ---LPLNLYQIQSKYRDEKRPR-NGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVD---IREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIG-VSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITV---NVKDQESQDLTEKIEADLMLKGYEVLTDDRNER-VGSKFSDSDLIGLP-IRVTVGKKASE-GIVEVKIKASGDTIEVHADNLIETLEILTKK------------------------------ |
3A32 Chain:A ((7-471)) | ----KTHIDYAYELDITVKPDSRVPVFNREFATFTGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLFDI-EGHEFAVKPMNCPYHILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVP----------------------------------------------------------------GGRVIDVVYDVFEEMKLVLERLF-----------------KLGV--------------------------------------SSETFKVRLSMSDKSLIGKEFMG---------------------SKEEWEGAEEALREAASRINEKYGIDIVELE---------GEAAFYG-------PKLDFIMMVEESGVSKEWQMGTIQFD----------------FNLPRRFR--LYDVVREEFGIEEVYIIHRALLGSIERFLGVYLEHRRG-----------------RMPFTLAPIQFAVIAVKTGGEVDREIEDLASSIAKGLLDKGFRVAVKGSSKTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAIAYGDAADAVENLAAVAEELESPVRSLSGQAPRIPADFSFML |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70450 for 3375 contacts (-20.9/contact) +
2D Compatibility (PS) -44520 + (NN) -2028 + (LL) 11396
1D Compatibility (HY) -18400 + (ID) 4300
Total energy: -128302.0 ( -38.02 by residue)
QMean score : 0.286
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