Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQD------TFPLA-IGVLKGALPFMADLIKHIDTY---LEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1P18 Chain:B ((9-190))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1P18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143896 for 1337 contacts (-107.6/contact) +
2D Compatibility (PS) -18493 + (NN) -5393 + (LL) 728
1D Compatibility (HY) -21600 + (ID) 3900
Total energy: -192554.0 ( -144.02 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_1P18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P18-query.scw
PDB file :
Tito_Scwrl_1P18.pdb
: