Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLFKSFDASEKTQLICFPFAGGYSASFRPLHAFLQGECEMLAAEPPGHGTNQ-TS-AIEDLEELTDLYKQELNLRPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQ-R-KKVS---HLPD----DQFLDHIIQL----GGMPAE--LVENKEVMSF--FLP--SFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKK-CIRDAEGWKKWAKDITFHQFD-GGHMFLLSQTEEVAERIFAILNQHPIIQP
3V48 Chain:A ((8-261))-----SPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPA---SVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLL----


General information:
TITO was launched using:
RESULT:

Template: 3V48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1241 -160188 -129.08 -696.47
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -129.08
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3V48.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V48-query.scw
PDB file : Tito_Scwrl_3V48.pdb: