Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAM-SLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELEKQGKQVDIFTQNIDGLHKKAG--SRHVYELHGSIQTAACPACGARYD----LPHLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV-MHFDTLYEKLDQADLLLVIGTSLEVAPARFVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4V1C Chain:G ((18-206))-----------QRVVVMVGAGISTPSGIP-------------PYPEAIFELPFFFHNPKPFFTLAKELY----PGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCT----PFPGEDIRADVMADRVPRCP-------VCTGVVKPDIVFFGEPLPQRFLLHVVDFPMADLLLILGTSLEVEP-------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4V1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 709 -66179 -93.34 -416.22
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain G : 0.72

3D Compatibility (PKB) : -93.34
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4V1C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V1C-query.scw
PDB file : Tito_Scwrl_4V1C.pdb: