Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTAD-LASLLE--GVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSS-VYGEKQG--KVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD---MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAGEPSNTWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLYQGE
4ZRM Chain:A ((4-310))MNILVTGGAGFIGSHVVDKLIEN-GYGVIVVDNLSSGK---VEN-------LNRNALFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVRE-PARDAKTNIIGSLVLLEKSIKYGVKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGEAGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEKG--DNEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYFRKT----


General information:
TITO was launched using:
RESULT:

Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1774 -997 -0.56 -3.34
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -0.56
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4ZRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZRM-query.scw
PDB file : Tito_Scwrl_4ZRM.pdb: