Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAKAIDYRTRLSDFMTEHVFGAEADYDDYRRAAGPADHTAPPIIEELKTKAKDRGLWNLFLS-A---ESGLTN--LEYAPLAEMTGWSMEIAPEALNCAAPDTGNMEILHMFGTEQQRAQWLRPLLDGKIRSAFSMTEPAVASSDARNIETTISRDGADYVINGRKWWTSGAADPRCKILIVMGRTNPDAAAHQQQSMVLVPIDTPGVTIVRSTPVFGWQDRHGHCEIDYHNVRVPATNLLGEEGSGFAIAQARLGPGRIHHCMRALGAAERALALMVNRVRNRVAFGRPLAEQGVVQQAIAQSRNEIDQARLLCEKAAWTIDQHGNKEARHLVAMIKAVAPRVACDVIDRAIQVHGAAGVSDDTPLARLYGWHRAMRIFDGPDEVHLRSIARAELSREKSTFAAAVT |
| 5IDU Chain:A ((26-404)) | FEARHRELAAGIEAWATQHLACVQ--HDD-----------TDTTCRKLVRALGEAGWLKYGVGGAQYGGHGDTIDTRAVCLLRETLANHDGLADFALA---MQGLGSGAITLAGTHEQKIRYLPRVSKGEAIAAFALSEPD-AGSDVAAMSLQARAEGDCYVIDGDKTWISNGGI--ADFYVVFARTGEA-PGARGISAFIVDADTPGLQIAERIDVIAP---HPLARLHFDSARVPRSQMLGAPGEGFKIAMRTLDVFRTSVAAASLGFARRALQEGLARAASRKMFGQTLGDFQLTQTKLAQMALTIDSSALLVYRAAWLRDQGEN--VTREAAMAKWHASEGAQQVIDAAVQLWGGMGVQSGTTVERLYREIRALRIYEGATEVQQLIVGRDLLKAHAAQR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5IDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190564 for 3280 contacts (-58.1/contact) +
2D Compatibility (PS) -40070 + (NN) -15677 + (LL) 2128
1D Compatibility (HY) -12400 + (ID) 5450
Total energy: -262033.0 ( -79.89 by residue)
QMean score : 0.456
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