Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVPTVDMGIPGASVSSRSVADRPNRKRVLLAEPRGYCAGVDRAVETVERALQKHGPPVYVRHEIVHNRHVVDTLAKAGAVFVEETEQVPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAP---DHVQLVDGVDAVDQVTVRDEDKVVWLSQTTLSVDETMEIVGRLRRRFPKLQDPPSDDICYATQNRQVAVKAMAPECELVIVVGSRNSSNSVRLVEVALGAGARAAHLVDWADDIDSAWLDGVTTVGVTSGASVPEVLVRGVLERLAECGYDIVQPVTTANETLVFALPRELRSPR |
3DNF Chain:A ((1-281)) | ------------------------MVDIIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTLGPIIHNPQEVNRLKNLGVFPSQ-GEEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLGYLRACNGKGIVVETLEDIGEA--LKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVK--VINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPN-TYHIETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQEI--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186876 for 2275 contacts (-82.1/contact) +
2D Compatibility (PS) -30068 + (NN) -12260 + (LL) 2924
1D Compatibility (HY) -20400 + (ID) 4300
Total energy: -250980.0 ( -110.32 by residue)
QMean score : 0.562
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