Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQVTDMRSNSQGLSLTDSVYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ
2FZS Chain:K ((19-190))
-------------------IYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILT---------
General information:
TITO was launched using:
RESULT:
Template:
2FZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129827 for 1327 contacts (-97.8/contact) +
2D Compatibility (PS) -19365 + (NN) -10820 + (LL) 1456
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -183356.0 ( -138.17 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2FZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FZS-query.scw
PDB file :
Tito_Scwrl_2FZS.pdb
: