Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLGFWDIAVPIVGAPMAGGPS------TPALAAAVSNAGGLGFVAGGYLSADRLADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDD---DWVRKLEVV-----ADV---R-PEVVSF-TFGAP--PPDVVQRLSA-LGLLVSIT-VTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSAH--DVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGYPEVHQMTKPIRAAAVQADDPHGTNLWAGSAHRKTRPGPAADIIASLTPDVCSA |
| 2NLI Chain:A ((74-325)) | -ILGHK-IKAPFIMAPIAA-HGLAHTTKEAGTARAVSEFGTIMSISAYSGAT--F-EEISEGLN--GGPRWFQIYMAKDD----QQNRDILDEA----KSDGATAIIL-TADSTNRD-------YPFGMPIVQRYLRGTAEGM--YGASKQKISPRDIEEIAGHSGLPVFVKGIQHPEDADMAIKRGASGIWVSNHG--ARQLYE-------APGSFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGRPVLFGLALGGW-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118096 for 1734 contacts (-68.1/contact) +
2D Compatibility (PS) -23339 + (NN) -12540 + (LL) 7896
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -152729.0 ( -88.08 by residue)
QMean score : 0.519
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