Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFPGFARRFF-EQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLG------AVHGCGFAEVEGPFDLIVNGTSASLAGDV--PPL-AQSVIEPGRTVCYDMMYAKEPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
| 1NVT Chain:A ((11-284)) | TKVIGLIGHPVEHSFSPIMHNAAFKDKGLNYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIE-DGKAIGYNTDGIGARMAL-EEEIGRVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLRE-DMVVMDLIYNPLETVLLKEAKKVNA-KTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKITK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148933 for 2241 contacts (-66.5/contact) +
2D Compatibility (PS) -28422 + (NN) -12596 + (LL) 348
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -206803.0 ( -92.28 by residue)
QMean score : 0.494
|
|
|