Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRV-LYPGTFDPITKGHGDLIERASRLFDHVIIAVAASPKKNPLFSLEQRVALAQEVTKHLPNVEVVGFSTLLAHFVKEQKANVFLRGLRAVSDFEYEFQLANMNRQLAPDVESMFLTPSEKYSFISSTLVREIAALGGDIS----KFVHPAVADALAERFKR
3NV7 Chain:A ((3-157))
--KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEGLLAYLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISKA-------
General information:
TITO was launched using:
RESULT:
Template:
3NV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83722 for 899 contacts (-93.1/contact) +
2D Compatibility (PS) -16289 + (NN) -8187 + (LL) 948
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -126900.0 ( -141.16 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3NV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NV7-query.scw
PDB file :
Tito_Scwrl_3NV7.pdb
: