Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------MNYSRIALFGGFAAAALLAGCSASSGKPGGKDWTRWTCDS----KAVIEWRYIDGSKN---IVD---LRLKDEDDVVHHLEQEPAAVG-AFYSDGRLGFHLE-NDEGLVYWVETDDLIGRGCKAR
2NRR Chain:A ((344-494))
MEALEELMKLLNMKDFPYRIEGIDISHLYTVASLVVFEDGFPKKGDYRRYKIDDYESIRTVVKRRYSKHPLPNLLFVDGGIGQVNAAIEALKEIGKDCPVVGLATVVFENREIHLPHDHPVLRLLVQIRDETHRFAVSY
General information:
TITO was launched using:
RESULT:
Template:
2NRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32749 for 758 contacts (-43.2/contact) +
2D Compatibility (PS) -11797 + (NN) -3759 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -52555.0 ( -69.33 by residue)
QMean score : 0.188
(partial model without unconserved sides chains):
PDB file :
Tito_2NRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NRR-query.scw
PDB file :
Tito_Scwrl_2NRR.pdb
: