Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAESPTIRLERYSERHVEGLTALYNDPAVARQVLQMPYQSVEQRRKRLHDSADDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAVRDGRFVDVYSMARLRRVEGRVGE
3WR7 Chain:A ((1-167))
-----HSVKLRPLEREDLRYVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEIN--HVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIFQHQYLAEHK
General information:
TITO was launched using:
RESULT:
Template:
3WR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72939 for 1200 contacts (-60.8/contact) +
2D Compatibility (PS) -17839 + (NN) -6596 + (LL) 784
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -107090.0 ( -89.24 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3WR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WR7-query.scw
PDB file :
Tito_Scwrl_3WR7.pdb
: