Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFHVKMTVKLPV--DMDPQQAERLKAEEKEMAQRLQREGSWRHLWRI-------------------AG-------HYANYSLFDLPSVEALHDTLTRLPLFPYMDIEIDGLCRHPSSIHADDR
1S7I Chain:A ((7-122))
MKYLCLIYFDEAKLAAVPAEELAAIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGPFAETKEQLGGFYLIEARDLNQALQIAAKIPPGRLGCVEVRPVKEWE--------
General information:
TITO was launched using:
RESULT:
Template:
1S7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51892 for 569 contacts (-91.2/contact) +
2D Compatibility (PS) -9749 + (NN) -4294 + (LL) 284
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -69651.0 ( -122.41 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1S7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7I-query.scw
PDB file :
Tito_Scwrl_1S7I.pdb
: