Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDKKTQTRARILGAATQALLERGAVEPSVGEVMGAAGLTVGGFYAHFQSKDALMLEAFEQLLGKRRELLGELDPG-------------------LSGKERRALAAAFYLSRKHRDAQVDAGCPLP-ATLAEVARLPEGFREVLSRHVEIMVTSLAE-S-----PEETDVALADLVLMIGGLALARALGPGELSDRVLRAAKQAVN
3KKD Chain:A ((35-209))------QRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSAT-----DIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLT--ERREHLLAEQAFRQE-ALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQ----------------------


General information:
TITO was launched using:
RESULT:

Template: 3KKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44769 for 957 contacts (-46.8/contact) +
2D Compatibility (PS) -15819 + (NN) -11434 + (LL) 2628
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -71994.0 ( -75.23 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_3KKD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KKD-query.scw
PDB file : Tito_Scwrl_3KKD.pdb: