Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPM-YNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
1TIK Chain:A ((2-204))
SLSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIA-APMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSAE-----------
General information:
TITO was launched using:
RESULT:
Template:
1TIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112503 for 1539 contacts (-73.1/contact) +
2D Compatibility (PS) -22450 + (NN) -12429 + (LL) 816
1D Compatibility (HY) -17600 + (ID) 4400
Total energy: -168566.0 ( -109.53 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1TIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIK-query.scw
PDB file :
Tito_Scwrl_1TIK.pdb
: