Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLLPLAVLAALSSVHVASAQAADVSAAVGATGQSGMTYRLGLSWDWDKSWWQTSTGRLTGYWDAGYTYWEGGDEGAGKHSLSFAPVFVYEFAG--DSIKPFIEAGIGVAAFSGTRVG---------DQNLGSSLNFEDRIGAGLKFANGQSVGVRAIHYSNAGLKQPNDGIESYSLFYKIPI |
2F1V Chain:A ((76-157)) | -------------------------------------------------------------------------------VHHLPPTLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYM----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2958 for 383 contacts (-7.7/contact) +
2D Compatibility (PS) -7615 + (NN) -283 + (LL) 5328
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -12578.0 ( -32.84 by residue)
QMean score : 0.002
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