Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNETASHGINFDALGRDRQSLDLASESVELEVPGLNLFYGAKQALFDVRMNIPKQRVTAFIGPSGCGKSTLLRCFNRMNDLVDGCRVEGEIRLDGHNIFAKGVDVAELRRRVGMVFQKPNPFPKSIYENVVYG------LRIQGINKKRVLDEAVEWALKGAALWEEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPCSALDPISTLKIEELIYELKSKFTIVIVTHNMQQAARVSDYTAFMYMGKLIEFGDTDTLFTNPAKKQTEDYITGRYG
4AYX Chain:A ((362-572))-----------------------------------------------DFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGT-----ISLDGHDI--RQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTV---VGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRL-STIKNANMVAVLDQGKITEYGKHEELLSKP--------------


General information:
TITO was launched using:
RESULT:

Template: 4AYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96305 for 1538 contacts (-62.6/contact) +
2D Compatibility (PS) -21633 + (NN) 328 + (LL) 4444
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -129616.0 ( -84.28 by residue)
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_4AYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AYX-query.scw
PDB file : Tito_Scwrl_4AYX.pdb: