Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVESIIIGGGPCGLSAAIEQKRKGIDTLIIEKGNVVESIYNYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKKMNNKFTITTTKDVYECRFLTIATGYYGQHNTLEVEGADLPKVF--HYFKEAH-----PYFDQDVVIIGGKNSAIDAALELEKAGANVTVLYRGGDYSPSIKPWILPNFTALVNHEKIDMEFNANVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYNKETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQNMLAKKQTPLES |
| 1XHC Chain:A ((9-302)) | ---SKVVIVGNGPGGFELAKQLSQ-TYEVTVIDKEPVPYYS--KPMLSHYI--------AGF--------IPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGR--KVVITEKGEVPYDTLVLATGAR--AREPQIKGKEY--LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-GLDEELSNMIKDMLEETGVKFFLNSELLEANEEGVLT-N---SGFIEGKVKICAIGIVPNVDLARRSGIHTG----RG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217710 for 2347 contacts (-92.8/contact) +
2D Compatibility (PS) -30135 + (NN) -6435 + (LL) 1792
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -263338.0 ( -112.20 by residue)
QMean score : 0.414
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