Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHEFAEGMRGM-NREIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDPKNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKKF------ETGVDEQSGILLKNNEEELAVVSLSFRAK--MPKRGVIACEEGFITVDEYPRASRATVTHTATGKV-EEI-E-VGETSKALEYEITAMEESVATG-EN-MTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 3EZY Chain:A ((2-330)) | --SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKPHVLRITSRDPAPP-PLDY---IRVSGGIFLDMTIHDFDMARYIMGEEVEEVFADGSVLVDEEIGKAGDVDTAVVVLRFKSGALGVIDNSRRAVYGYDQRIEVFGSKGRIFADNVR-ETTVVLTDEQGDRGSRYLYFFLERYRDSYLEELKTFIKNVKSGEPPAVSGEDGKMALLLGYAAKKSLEEKRSVK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164953 for 2601 contacts (-63.4/contact) +
2D Compatibility (PS) -34189 + (NN) -8366 + (LL) 268
1D Compatibility (HY) -16400 + (ID) 3100
Total energy: -226740.0 ( -87.17 by residue)
QMean score : 0.561
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