Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLERTEQSEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKMQTWTLEEVRIFSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGE-VEKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQVED |
2QFC Chain:A ((3-286)) | AEKLGSEIKKIRVLRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL----TGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSR---YEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKEALVNKISRL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95598 for 2082 contacts (-45.9/contact) +
2D Compatibility (PS) -29519 + (NN) -7187 + (LL) 1476
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -137778.0 ( -66.18 by residue)
QMean score : 0.338
|
|
|