Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDIKEIREALPHRYPMLLVDRVLEVSEDE-IVAIKNVSINEPFFNGHFPEYPVMPGVLIMEALAQTAGVLEL-SKEENKGKLVFYAGMDKVKFKKQVVPGDQLVMTAKFVKRRGT-IAVVEAIAEVDGKLAAS-GTLTFAIGN
3AZ9 Chain:Q ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFK--GIAKLSGVGYVNGKVVINISEMTFAL--
General information:
TITO was launched using:
RESULT:
Template:
3AZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103815 for 984 contacts (-105.5/contact) +
2D Compatibility (PS) -14585 + (NN) -3722 + (LL) -164
1D Compatibility (HY) -17600 + (ID) 3350
Total energy: -143236.0 ( -145.57 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3AZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZ9-query.scw
PDB file :
Tito_Scwrl_3AZ9.pdb
: