Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP
2P2L Chain:C ((5-140))
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTP
General information:
TITO was launched using:
RESULT:
Template:
2P2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66443 for 944 contacts (-70.4/contact) +
2D Compatibility (PS) -14451 + (NN) -6360 + (LL) 0
1D Compatibility (HY) -19200 + (ID) 5100
Total energy: -111554.0 ( -118.17 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2P2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P2L-query.scw
PDB file :
Tito_Scwrl_2P2L.pdb
: